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Random linear codes (RLCs) are well known to have nice combinatorial properties and near-optimal parameters in many different settings. However, getting explicit constructions matching the parameters of RLCs is challenging, and RLCs are hard to decode efficiently. This motivated several previous works to study the problem of partially derandomizing RLCs, by applying certain operations to an explicit mother code. Among them, one of the most well studied operations is random puncturing, where a series of works culminated in the work of Guruswami and Mosheiff (FOCS’ 22), which showed that a random puncturing of a low-biased code is likely to possess almost all interesting local properties of RLCs. In this work, we provide an in-depth study of another, dual operation of random puncturing, known as random shortening, which can be viewed equivalently as random puncturing on the dual code. Our main results show that for any small , by starting from a mother code with certain weaker conditions (e.g., having a large distance) and performing a random (or even pseudorandom) shortening, the new code is -biased with high probability. Our results hold for any field size and yield a shortened code with constant rate. This can be viewed as a complement to random puncturing, and together, we can obtain codes with properties like RLCs from weaker initial conditions. Our proofs involve several non-trivial methods of estimating the weight distribution of codewords, which may be of independent interest. 

Abstract Maximum likelihood (ML) phylogenetic inference is widely used in phylogenomics. As heuristic searches most likely find suboptimal trees, it is recommended to conduct multiple (e.g., 10) tree searches in phylogenetic analyses. However, beyond its positive role, how and to what extent multiple tree searches aid ML phylogenetic inference remains poorly explored. Here, we found that a random starting tree was not as effective as the BioNJ and parsimony starting trees in inferring the ML gene tree and that RAxML-NG and PhyML were less sensitive to different starting trees than IQ-TREE. We then examined the effect of the number of tree searches on ML tree inference with IQ-TREE and RAxML-NG, by running 100 tree searches on 19,414 gene alignments from 15 animal, plant, and fungal phylogenomic datasets. We found that the number of tree searches substantially impacted the recovery of the best-of-100 ML gene tree topology among 100 searches for a given ML program. In addition, all of the concatenation-based trees were topologically identical if the number of tree searches was ≥10. Quartet-based ASTRAL trees inferred from 1 to 80 tree searches differed topologically from those inferred from 100 tree searches for 6/15 phylogenomic datasets. Finally, our simulations showed that gene alignments with lower difficulty scores had a higher chance of finding the best-of-100 gene tree topology and were more likely to yield the correct trees. 

Two seven-coordinate mononuclear Co(ii) complexes are proved to have field-induced magnetic relaxation and one of them possesses capped octahedral geometry.